GeneAnnotationReader Class Reference

Provides GeneAnnotation objects as read from a GFF3 file. More...

#include <geneannotated.hh>

List of all members.

Public Member Functions
	GeneAnnotationReader (const std::string &fname)
	Parse GFF3 from fname.
std::vector< GeneAnnotation >	lookup (uint64_t pos)
	Get all annotations for pos.
uint64_t	size () const
	Number of annotations known.

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Detailed Description

Provides GeneAnnotation objects as read from a GFF3 file.

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Constructor & Destructor Documentation

GeneAnnotationReader::GeneAnnotationReader

(

const std::string &

fname

)

Parse GFF3 from fname.

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Member Function Documentation

vector< GeneAnnotation > GeneAnnotationReader::lookup

(

uint64_t

pos

)

Get all annotations for pos.

uint64_t GeneAnnotationReader::size

(

)

const [inline]

Number of annotations known.

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The documentation for this class was generated from the following files:

• geneannotated.hh
• geneannotated.cc