fastq.hh File Reference

#include <string>
#include <stdio.h>
#include <stdint.h>
#include <stdexcept>

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Classes
struct	FastQRead
	Represents a FastQRead. Can be reversed or not. More...
class	FASTQReader
	Reads a single FASTQ file, and can seek in it. Does adapation of quality scores (Sanger by default) and and can also snip off first n or last n bases. More...
class	StereoFASTQReader
	Reads FASTQs from two (synchronised) files at a time. Does magic with 64 bits offsets to encode which of the two FASTQReader to read from. More...